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htseq-count v0.11.1  (Gallus BioPharmaceuticals)

 
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    Gallus BioPharmaceuticals htseq-count v0.11.1
    Htseq Count V0.11.1, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/htseq/htseq+count+v0+11+1/pm40383208-78-15-36
    Average 90 stars, based on 1 article reviews
    htseq-count v0.11.1 - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Software:

    Article Title: Transcriptomics reveals the molecular regulation of Chinese medicine formula on improving bone quality in broiler
    Article Snippet: .. The BAM files were compared with the Gallus gallus genome annotation file (ftp.ensembl.org/pub/release-95/gtf/gallus_gallus/) using software HTSeq (Version 0.9.0, https://github.com/simon-anders/htseq ) to complete the gene annotation and obtain the gene counts of each sample in different groups. .. The software DEseq2 (Version 1.20.0, https://github.com/mikelove/DESeq2 ), R language (Version 3.5.1, https://www.r-project.org/ ) and its auxiliary software platform RStudio (Version 1.1.463, https://www.rstudio.com/ ) for differentially expressed gene ( DEG ) analysis.

    Article Title: Combined Transcriptome and Metabolome Analysis of Stable Knockdown and Overexpression of the CD8A Gene in Chicken T Lymphocytes
    Article Snippet: .. The software HTSeq (Version 0.9.0) was subsequently used to compare the BAM file with the root-chicken genome annotation file Gallus_gallus.GRCg6a.95.gtf to complete gene annotation and obtain the gene counts of each sample in different groups. ..

    Article Title: Transcriptomics reveals the molecular regulation of Chinese medicine formula on improving bone quality in broiler.
    Article Snippet: .. The BAM files were compared with the Gallus gallus genome annotation file (ftp.ensembl.org/pub/release-95/gtf/gallus_gallus/) using software HTSeq (Version 0.9.0, https:// github.com/simon-anders/htseq) to complete the gene annotation and obtain the gene counts of each sample in different groups. .. Differentially Expressed Genes Analysis The software DEseq2 (Version 1.20.0, https://github.com/mike love/DESeq2), R language (Version 3.5.1, https:// www.r-project.org/) and its auxiliary software platform RStudio (Version 1.1.463, https://www.rstudio.com/) for differentially expressed gene (DEG) analysis.

    Generated:

    Article Title: Single-Cell-Based Analysis Highlights a Surge in Cell-to-Cell Molecular Variability Preceding Irreversible Commitment in a Differentiation Process
    Article Snippet: .. The gene counts table was generated using HTSeq [ ] and the chr_M_Gallus_gallus.Galgal4.72.gtf annotated genome version. ..



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